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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs59368430 chr11:49630928 AT/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.26 8.82E-10 Box Plot
THCA rs59416496 chr8:11789282 A/G SGK223 chr8:8175258-8244008:- -0.46 -8.61 1.05E-16 Box Plot
THCA rs59423463 chr8:11788694 T/C SGK223 chr8:8175258-8244008:- -0.45 -8.43 3.96E-16 Box Plot
THCA rs59423628 chr5:49517167 CTG/C LOC647121 chr1:121260910-121313686:+ -0.36 -7.68 9.27E-14 Box Plot
THCA rs59480276 chr6:151785015 C/T NEK5 chr13:52607747-52703214:- 0.59 6.95 1.22E-11 Box Plot
THCA rs595234 chr11:49201668 C/G FOLH1B chr11:89372395-89431886:+ 0.49 8.04 7.24E-15 Box Plot
THCA rs59525124 chr6:116660477 CT/CTT ECSIT chr19:11616731-11639989:- -0.23 -6.26 8.54E-10 Box Plot
THCA rs59539470 chr2:132248336 C/G TUBA3E chr2:130949316-130956034:- 0.51 5.89 7.25E-9 Box Plot
THCA rs596712 chr11:49201371 C/T FOLH1B chr11:89372395-89431886:+ 0.49 8.04 7.24E-15 Box Plot
THCA rs596740 chr11:49247266 G/A FOLH1B chr11:89372395-89431886:+ 0.46 6.81 2.9E-11 Box Plot
THCA rs596754 chr11:49247256 C/T FOLH1B chr11:89372395-89431886:+ 0.46 6.81 2.9E-11 Box Plot
THCA rs59678548 chr6:28144811 TAG/T BTN3A2 chr6:26365387-26378548:+ -0.3 -6.39 3.88E-10 Box Plot
THCA rs597346 chr11:77653356 G/T INTS4L1 chr7:64601603-64694600:+ 0.36 6.04 3.04E-9 Box Plot
THCA rs59737888 chr5:176587375 C/T LOC388955 chr2:63849182-63850159:- -0.94 -24.19 4.96E-85 Box Plot
THCA rs59743198 chr6:28050774 TAAAA/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot